Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.56□□□□□ -0.4
Nup43P59235 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Nup43P59235 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nup43P59235 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.56□□□□□ -0.4
Nup43P59235 Mir874-201ENSMUST00000104769 76 ntBASIC12.56□□□□□ -0.4
Nup43P59235 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.56□□□□□ -0.4
Nup43P59235 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.56□□□□□ -0.4
Nup43P59235 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Gm38671-201ENSMUST00000200573 130 ntBASIC12.56□□□□□ -0.4
Nup43P59235 Gm7287-201ENSMUST00000205267 602 ntBASIC12.56□□□□□ -0.4
Nup43P59235 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.56□□□□□ -0.4
Nup43P59235 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.56□□□□□ -0.4
Nup43P59235 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Nup43P59235 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.56□□□□□ -0.4
Nup43P59235 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup43P59235 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Nup43P59235 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Nup43P59235 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.55□□□□□ -0.4
Nup43P59235 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.55□□□□□ -0.4
Nup43P59235 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.55□□□□□ -0.4
Nup43P59235 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.55□□□□□ -0.4
Nup43P59235 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nup43P59235 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.55□□□□□ -0.4
Nup43P59235 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nup43P59235 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.55□□□□□ -0.4
Nup43P59235 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Gm6447-201ENSMUST00000118905 835 ntBASIC12.55□□□□□ -0.4
Nup43P59235 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.55□□□□□ -0.4
Nup43P59235 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Nup43P59235 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.55□□□□□ -0.4
Nup43P59235 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.55□□□□□ -0.4
Nup43P59235 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.55□□□□□ -0.4
Nup43P59235 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.55□□□□□ -0.4
Nup43P59235 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.55□□□□□ -0.4
Nup43P59235 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.55□□□□□ -0.4
Nup43P59235 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup43P59235 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup43P59235 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.54□□□□□ -0.4
Nup43P59235 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms