Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Sssca1P56873 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Sssca1P56873 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Sssca1P56873 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.75□□□□□ -0.69
Sssca1P56873 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Sssca1P56873 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.75□□□□□ -0.69
Sssca1P56873 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.75□□□□□ -0.69
Sssca1P56873 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Sssca1P56873 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Sssca1P56873 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.75□□□□□ -0.69
Sssca1P56873 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.75□□□□□ -0.69
Sssca1P56873 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.75□□□□□ -0.69
Sssca1P56873 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Sssca1P56873 Gm10253-201ENSMUST00000194270 940 ntBASIC10.75□□□□□ -0.69
Sssca1P56873 Shd-206ENSMUST00000225145 998 ntBASIC10.75□□□□□ -0.69
Sssca1P56873 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Sssca1P56873 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.75□□□□□ -0.69
Sssca1P56873 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.75□□□□□ -0.69
Sssca1P56873 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.75□□□□□ -0.69
Sssca1P56873 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.75□□□□□ -0.69
Sssca1P56873 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.75□□□□□ -0.69
Sssca1P56873 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sssca1P56873 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Sssca1P56873 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Sssca1P56873 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sssca1P56873 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sssca1P56873 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.74□□□□□ -0.69
Sssca1P56873 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.74□□□□□ -0.69
Sssca1P56873 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Sssca1P56873 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Sssca1P56873 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Gm6912-201ENSMUST00000117218 544 ntBASIC10.74□□□□□ -0.69
Sssca1P56873 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.74□□□□□ -0.69
Sssca1P56873 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.74□□□□□ -0.69
Sssca1P56873 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.74□□□□□ -0.69
Sssca1P56873 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.74□□□□□ -0.69
Sssca1P56873 Gm10766-202ENSMUST00000194123 606 ntBASIC10.74□□□□□ -0.69
Sssca1P56873 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Gm46209-201ENSMUST00000217912 553 ntBASIC10.74□□□□□ -0.69
Sssca1P56873 Gm5779-201ENSMUST00000218467 910 ntBASIC10.74□□□□□ -0.69
Sssca1P56873 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC10.74□□□□□ -0.69
Sssca1P56873 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sssca1P56873 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.74□□□□□ -0.69
Sssca1P56873 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms