Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.54□□□□□ -0.24
Sox1P53783 Gm44651-201ENSMUST00000207343 372 ntBASIC13.54□□□□□ -0.24
Sox1P53783 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox1P53783 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Sox1P53783 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox1P53783 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox1P53783 Gm18730-201ENSMUST00000218038 343 ntBASIC13.54□□□□□ -0.24
Sox1P53783 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.54□□□□□ -0.24
Sox1P53783 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox1P53783 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sox1P53783 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox1P53783 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox1P53783 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sox1P53783 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox1P53783 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.54□□□□□ -0.24
Sox1P53783 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.54□□□□□ -0.24
Sox1P53783 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox1P53783 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox1P53783 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox1P53783 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox1P53783 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.53□□□□□ -0.24
Sox1P53783 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox1P53783 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox1P53783 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox1P53783 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Sox1P53783 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sox1P53783 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.53□□□□□ -0.24
Sox1P53783 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox1P53783 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox1P53783 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.53□□□□□ -0.24
Sox1P53783 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox1P53783 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox1P53783 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox1P53783 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox1P53783 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox1P53783 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.53□□□□□ -0.24
Sox1P53783 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC13.53□□□□□ -0.24
Sox1P53783 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.53□□□□□ -0.24
Sox1P53783 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox1P53783 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox1P53783 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.53□□□□□ -0.24
Sox1P53783 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.53□□□□□ -0.24
Sox1P53783 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox1P53783 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox1P53783 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.53□□□□□ -0.24
Sox1P53783 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox1P53783 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox1P53783 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox1P53783 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sox1P53783 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox1P53783 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox1P53783 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox1P53783 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox1P53783 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Sox1P53783 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox1P53783 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Sox1P53783 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox1P53783 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox1P53783 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox1P53783 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Sox1P53783 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox1P53783 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.52□□□□□ -0.24
Sox1P53783 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox1P53783 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox1P53783 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox1P53783 Gm17391-201ENSMUST00000171036 126 ntBASIC13.52□□□□□ -0.25
Sox1P53783 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.52□□□□□ -0.25
Sox1P53783 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.52□□□□□ -0.25
Sox1P53783 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.52□□□□□ -0.25
Sox1P53783 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox1P53783 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
Sox1P53783 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Sox1P53783 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sox1P53783 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox1P53783 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sox1P53783 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox1P53783 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.52□□□□□ -0.25
Sox1P53783 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox1P53783 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox1P53783 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.52□□□□□ -0.25
Sox1P53783 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox1P53783 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox1P53783 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox1P53783 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox1P53783 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox1P53783 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox1P53783 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox1P53783 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.51□□□□□ -0.25
Sox1P53783 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox1P53783 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox1P53783 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox1P53783 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox1P53783 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox1P53783 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.51□□□□□ -0.25
Sox1P53783 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sox1P53783 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox1P53783 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Sox1P53783 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox1P53783 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox1P53783 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms