Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Brca1P48754 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.65□□□□□ -0.06
Brca1P48754 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
Brca1P48754 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Brca1P48754 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.65□□□□□ -0.06
Brca1P48754 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Brca1P48754 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.64□□□□□ -0.07
Brca1P48754 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Brca1P48754 Gm17391-201ENSMUST00000171036 126 ntBASIC14.64□□□□□ -0.07
Brca1P48754 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.64□□□□□ -0.07
Brca1P48754 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.64□□□□□ -0.07
Brca1P48754 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.64□□□□□ -0.07
Brca1P48754 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Brca1P48754 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.64□□□□□ -0.07
Brca1P48754 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Brca1P48754 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Brca1P48754 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Brca1P48754 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Brca1P48754 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brca1P48754 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Brca1P48754 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.64□□□□□ -0.07
Brca1P48754 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.64□□□□□ -0.07
Brca1P48754 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Brca1P48754 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.63□□□□□ -0.07
Brca1P48754 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Brca1P48754 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.63□□□□□ -0.07
Brca1P48754 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.63□□□□□ -0.07
Brca1P48754 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.63□□□□□ -0.07
Brca1P48754 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.63□□□□□ -0.07
Brca1P48754 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.63□□□□□ -0.07
Brca1P48754 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Brca1P48754 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.63□□□□□ -0.07
Brca1P48754 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Brca1P48754 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brca1P48754 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Brca1P48754 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.62□□□□□ -0.07
Brca1P48754 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.62□□□□□ -0.07
Brca1P48754 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Brca1P48754 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms