Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.3□□□□□ -0.44
Foxa1P35582 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.3□□□□□ -0.44
Foxa1P35582 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.3□□□□□ -0.44
Foxa1P35582 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.3□□□□□ -0.44
Foxa1P35582 Gm45841-201ENSMUST00000207700 164 ntBASIC12.3□□□□□ -0.44
Foxa1P35582 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.3□□□□□ -0.44
Foxa1P35582 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.3□□□□□ -0.44
Foxa1P35582 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Foxa1P35582 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.3□□□□□ -0.44
Foxa1P35582 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.29□□□□□ -0.44
Foxa1P35582 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Foxa1P35582 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Foxa1P35582 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Foxa1P35582 Gm6447-201ENSMUST00000118905 835 ntBASIC12.29□□□□□ -0.44
Foxa1P35582 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.29□□□□□ -0.44
Foxa1P35582 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Foxa1P35582 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Gm6152-201ENSMUST00000151704 340 ntBASIC12.29□□□□□ -0.44
Foxa1P35582 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Foxa1P35582 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.29□□□□□ -0.44
Foxa1P35582 Gm18473-201ENSMUST00000220543 868 ntBASIC12.29□□□□□ -0.44
Foxa1P35582 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Foxa1P35582 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Foxa1P35582 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Foxa1P35582 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Foxa1P35582 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Foxa1P35582 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Foxa1P35582 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.29□□□□□ -0.44
Foxa1P35582 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.29□□□□□ -0.44
Foxa1P35582 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxa1P35582 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Foxa1P35582 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Foxa1P35582 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.28□□□□□ -0.44
Foxa1P35582 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.28□□□□□ -0.44
Foxa1P35582 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.28□□□□□ -0.44
Foxa1P35582 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.28□□□□□ -0.44
Foxa1P35582 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Foxa1P35582 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Foxa1P35582 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Gm5687-201ENSMUST00000118252 640 ntBASIC12.28□□□□□ -0.44
Foxa1P35582 Gm11424-201ENSMUST00000121929 829 ntBASIC12.28□□□□□ -0.44
Foxa1P35582 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms