Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC17.12■□□□□ 0.33
Hoxc9P09633 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Hoxc9P09633 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hoxc9P09633 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Hoxc9P09633 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hoxc9P09633 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 Ighv8-10-201ENSMUST00000199579 358 ntBASIC17.11■□□□□ 0.33
Hoxc9P09633 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 Gm5363-201ENSMUST00000211927 938 ntBASIC17.11■□□□□ 0.33
Hoxc9P09633 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC17.11■□□□□ 0.33
Hoxc9P09633 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxc9P09633 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hoxc9P09633 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc9P09633 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc9P09633 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hoxc9P09633 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc9P09633 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hoxc9P09633 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc9P09633 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc9P09633 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc9P09633 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC17.1■□□□□ 0.33
Hoxc9P09633 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc9P09633 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC17.1■□□□□ 0.33
Hoxc9P09633 Gm43416-201ENSMUST00000201916 1015 ntBASIC17.1■□□□□ 0.33
Hoxc9P09633 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC17.1■□□□□ 0.33
Hoxc9P09633 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC17.1■□□□□ 0.33
Hoxc9P09633 Gm18615-201ENSMUST00000222919 1031 ntBASIC17.1■□□□□ 0.33
Hoxc9P09633 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc9P09633 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC17.1■□□□□ 0.33
Hoxc9P09633 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc9P09633 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc9P09633 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC17.1■□□□□ 0.33
Hoxc9P09633 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc9P09633 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc9P09633 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxc9P09633 Daam2-202ENSMUST00000224595 1926 ntBASIC17.09■□□□□ 0.33
Hoxc9P09633 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Gm14752-201ENSMUST00000120719 2075 ntBASIC17.09■□□□□ 0.33
Hoxc9P09633 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC17.09■□□□□ 0.33
Hoxc9P09633 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC17.09■□□□□ 0.33
Hoxc9P09633 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Hoxc9P09633 Gm16505-201ENSMUST00000179981 232 ntBASIC17.09■□□□□ 0.33
Hoxc9P09633 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC17.09■□□□□ 0.33
Hoxc9P09633 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC17.09■□□□□ 0.33
Hoxc9P09633 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC17.09■□□□□ 0.33
Hoxc9P09633 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxc9P09633 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
Hoxc9P09633 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxc9P09633 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxc9P09633 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hoxc9P09633 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hoxc9P09633 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hoxc9P09633 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxc9P09633 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxc9P09633 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc9P09633 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc9P09633 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc9P09633 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc9P09633 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc9P09633 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc9P09633 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc9P09633 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms