Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.05□□□□□ -0.16
Hoxc8P09025 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.05□□□□□ -0.16
Hoxc8P09025 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc8P09025 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Gm12058-201ENSMUST00000118614 437 ntBASIC14.04□□□□□ -0.16
Hoxc8P09025 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.04□□□□□ -0.16
Hoxc8P09025 Gm14017-201ENSMUST00000121934 386 ntBASIC14.04□□□□□ -0.16
Hoxc8P09025 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc8P09025 Gm16505-201ENSMUST00000179981 232 ntBASIC14.04□□□□□ -0.16
Hoxc8P09025 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.04□□□□□ -0.16
Hoxc8P09025 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.04□□□□□ -0.16
Hoxc8P09025 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.04□□□□□ -0.16
Hoxc8P09025 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.04□□□□□ -0.16
Hoxc8P09025 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.04□□□□□ -0.16
Hoxc8P09025 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxc8P09025 Gm22058-201ENSMUST00000083393 310 ntBASIC14.04□□□□□ -0.16
Hoxc8P09025 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.04□□□□□ -0.16
Hoxc8P09025 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc8P09025 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc8P09025 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc8P09025 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc8P09025 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc8P09025 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc8P09025 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.04□□□□□ -0.16
Hoxc8P09025 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hoxc8P09025 Gm14921-201ENSMUST00000118643 908 ntBASIC14.03□□□□□ -0.16
Hoxc8P09025 Gm13736-201ENSMUST00000119272 253 ntBASIC14.03□□□□□ -0.16
Hoxc8P09025 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Mir5132-201ENSMUST00000175166 71 ntBASIC14.03□□□□□ -0.16
Hoxc8P09025 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.03□□□□□ -0.16
Hoxc8P09025 Gm5904-201ENSMUST00000210286 865 ntBASIC14.03□□□□□ -0.16
Hoxc8P09025 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.03□□□□□ -0.16
Hoxc8P09025 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hoxc8P09025 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.03□□□□□ -0.16
Hoxc8P09025 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxc8P09025 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxc8P09025 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hoxc8P09025 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Hoxc8P09025 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxc8P09025 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxc8P09025 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc8P09025 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Hoxc8P09025 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc8P09025 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc8P09025 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc8P09025 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc8P09025 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc8P09025 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc8P09025 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc8P09025 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc8P09025 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc8P09025 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.02□□□□□ -0.16
Hoxc8P09025 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc8P09025 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc8P09025 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc8P09025 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.02□□□□□ -0.16
Hoxc8P09025 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc8P09025 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc8P09025 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms