Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hbb-b1P02088 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Hbb-b1P02088 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Hbb-b1P02088 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Hbb-b1P02088 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Hbb-b1P02088 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hbb-b1P02088 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hbb-b1P02088 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Hbb-b1P02088 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hbb-b1P02088 CT025626.1-201ENSMUST00000223735 1455 ntBASIC9.33□□□□□ -0.92
Hbb-b1P02088 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hbb-b1P02088 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Hbb-b1P02088 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hbb-b1P02088 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Hbb-b1P02088 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Hbb-b1P02088 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hbb-b1P02088 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC9.33□□□□□ -0.92
Hbb-b1P02088 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.33□□□□□ -0.92
Hbb-b1P02088 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.33□□□□□ -0.92
Hbb-b1P02088 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Hbb-b1P02088 AC119177.1-201ENSMUST00000227647 1332 ntBASIC9.32□□□□□ -0.92
Hbb-b1P02088 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Gm13233-201ENSMUST00000118760 1443 ntBASIC9.32□□□□□ -0.92
Hbb-b1P02088 Gm13244-201ENSMUST00000118855 1446 ntBASIC9.32□□□□□ -0.92
Hbb-b1P02088 Gm8668-201ENSMUST00000120559 1447 ntBASIC9.32□□□□□ -0.92
Hbb-b1P02088 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.32□□□□□ -0.92
Hbb-b1P02088 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Gm16026-204ENSMUST00000162652 683 ntBASIC9.32□□□□□ -0.92
Hbb-b1P02088 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Gm44124-201ENSMUST00000204159 472 ntBASIC9.32□□□□□ -0.92
Hbb-b1P02088 AC159106.1-201ENSMUST00000224421 690 ntBASIC9.32□□□□□ -0.92
Hbb-b1P02088 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Gm3052-202ENSMUST00000188254 2224 ntBASIC9.32□□□□□ -0.92
Hbb-b1P02088 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Gm43727-201ENSMUST00000198021 2647 ntBASIC9.32□□□□□ -0.92
Hbb-b1P02088 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hbb-b1P02088 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms