Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
TcraP01849 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
TcraP01849 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
TcraP01849 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Rnf17-202ENSMUST00000223627 2077 ntBASIC9.7□□□□□ -0.86
TcraP01849 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC9.7□□□□□ -0.86
TcraP01849 AC122314.1-201ENSMUST00000223056 2239 ntBASIC9.7□□□□□ -0.86
TcraP01849 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
TcraP01849 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
TcraP01849 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
TcraP01849 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC9.7□□□□□ -0.86
TcraP01849 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC9.7□□□□□ -0.86
TcraP01849 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC9.7□□□□□ -0.86
TcraP01849 AC133598.3-202ENSMUST00000224219 531 ntBASIC9.7□□□□□ -0.86
TcraP01849 AC123645.1-201ENSMUST00000228469 605 ntBASIC9.7□□□□□ -0.86
TcraP01849 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
TcraP01849 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
TcraP01849 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
TcraP01849 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
TcraP01849 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.7□□□□□ -0.86
TcraP01849 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TcraP01849 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.7□□□□□ -0.86
TcraP01849 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC9.69□□□□□ -0.86
TcraP01849 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
TcraP01849 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC9.69□□□□□ -0.86
TcraP01849 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC9.69□□□□□ -0.86
TcraP01849 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC9.69□□□□□ -0.86
TcraP01849 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Gm1401-201ENSMUST00000122048 772 ntBASIC9.69□□□□□ -0.86
TcraP01849 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC9.69□□□□□ -0.86
TcraP01849 Gm9727-201ENSMUST00000161387 555 ntBASIC9.69□□□□□ -0.86
TcraP01849 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
TcraP01849 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC9.69□□□□□ -0.86
TcraP01849 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
TcraP01849 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
TcraP01849 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
TcraP01849 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
TcraP01849 Gm18206-201ENSMUST00000207027 926 ntBASIC9.69□□□□□ -0.86
TcraP01849 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
TcraP01849 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
TcraP01849 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
TcraP01849 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
TcraP01849 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
TcraP01849 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC9.69□□□□□ -0.86
TcraP01849 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms