Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.93□□□□□ -0.5
SgceO70258 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.93□□□□□ -0.5
SgceO70258 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SgceO70258 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.93□□□□□ -0.5
SgceO70258 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SgceO70258 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.93□□□□□ -0.5
SgceO70258 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.93□□□□□ -0.5
SgceO70258 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.93□□□□□ -0.5
SgceO70258 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.93□□□□□ -0.5
SgceO70258 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.93□□□□□ -0.5
SgceO70258 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SgceO70258 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.93□□□□□ -0.5
SgceO70258 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SgceO70258 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgceO70258 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.92□□□□□ -0.5
SgceO70258 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.92□□□□□ -0.5
SgceO70258 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SgceO70258 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
SgceO70258 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
SgceO70258 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.92□□□□□ -0.5
SgceO70258 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SgceO70258 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.92□□□□□ -0.5
SgceO70258 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
SgceO70258 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
SgceO70258 Gm5279-201ENSMUST00000199575 745 ntBASIC11.92□□□□□ -0.5
SgceO70258 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SgceO70258 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SgceO70258 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.92□□□□□ -0.5
SgceO70258 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.92□□□□□ -0.5
SgceO70258 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
SgceO70258 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.92□□□□□ -0.5
SgceO70258 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.92□□□□□ -0.5
SgceO70258 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgceO70258 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SgceO70258 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgceO70258 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SgceO70258 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgceO70258 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgceO70258 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgceO70258 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgceO70258 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SgceO70258 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SgceO70258 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SgceO70258 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgceO70258 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms