Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Stx1aO35526 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Stx1aO35526 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.95□□□□□ -0.02
Stx1aO35526 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.95□□□□□ -0.02
Stx1aO35526 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.95□□□□□ -0.02
Stx1aO35526 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.95□□□□□ -0.02
Stx1aO35526 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Stx1aO35526 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Stx1aO35526 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.95□□□□□ -0.02
Stx1aO35526 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Stx1aO35526 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Stx1aO35526 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.95□□□□□ -0.02
Stx1aO35526 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Stx1aO35526 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Stx1aO35526 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Stx1aO35526 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.94□□□□□ -0.02
Stx1aO35526 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.94□□□□□ -0.02
Stx1aO35526 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.94□□□□□ -0.02
Stx1aO35526 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Stx1aO35526 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Stx1aO35526 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.94□□□□□ -0.02
Stx1aO35526 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Gm25948-201ENSMUST00000175334 112 ntBASIC14.94□□□□□ -0.02
Stx1aO35526 Gm3436-201ENSMUST00000179930 840 ntBASIC14.94□□□□□ -0.02
Stx1aO35526 Gm18905-201ENSMUST00000205454 928 ntBASIC14.94□□□□□ -0.02
Stx1aO35526 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Stx1aO35526 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Stx1aO35526 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Stx1aO35526 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.94□□□□□ -0.02
Stx1aO35526 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.93□□□□□ -0.02
Stx1aO35526 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stx1aO35526 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stx1aO35526 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.93□□□□□ -0.02
Stx1aO35526 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stx1aO35526 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Stx1aO35526 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stx1aO35526 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stx1aO35526 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Stx1aO35526 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
Stx1aO35526 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.93□□□□□ -0.02
Stx1aO35526 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.93□□□□□ -0.02
Stx1aO35526 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Stx1aO35526 Gm43703-201ENSMUST00000200523 763 ntBASIC14.93□□□□□ -0.02
Stx1aO35526 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Stx1aO35526 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.93□□□□□ -0.02
Stx1aO35526 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.93□□□□□ -0.02
Stx1aO35526 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stx1aO35526 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stx1aO35526 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stx1aO35526 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Stx1aO35526 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stx1aO35526 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Stx1aO35526 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Stx1aO35526 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stx1aO35526 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Stx1aO35526 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stx1aO35526 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stx1aO35526 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Stx1aO35526 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stx1aO35526 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stx1aO35526 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Stx1aO35526 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Stx1aO35526 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Stx1aO35526 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stx1aO35526 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Stx1aO35526 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stx1aO35526 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stx1aO35526 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Stx1aO35526 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stx1aO35526 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Stx1aO35526 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.92□□□□□ -0.02
Stx1aO35526 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.92□□□□□ -0.02
Stx1aO35526 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Stx1aO35526 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.92□□□□□ -0.02
Stx1aO35526 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.92□□□□□ -0.02
Stx1aO35526 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Stx1aO35526 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stx1aO35526 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Stx1aO35526 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Stx1aO35526 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms