Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.11□□□□□ -0.15
Rfx8D3YU81 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Gm13689-201ENSMUST00000119360 685 ntBASIC14.11□□□□□ -0.15
Rfx8D3YU81 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.11□□□□□ -0.15
Rfx8D3YU81 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Rfx8D3YU81 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Gm6745-201ENSMUST00000199216 526 ntBASIC14.11□□□□□ -0.15
Rfx8D3YU81 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.1□□□□□ -0.15
Rfx8D3YU81 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Gm11918-201ENSMUST00000121660 179 ntBASIC14.1□□□□□ -0.15
Rfx8D3YU81 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Gm28911-201ENSMUST00000188837 117 ntBASIC14.1□□□□□ -0.15
Rfx8D3YU81 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx8D3YU81 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Gm9794-201ENSMUST00000202370 423 ntBASIC14.09□□□□□ -0.15
Rfx8D3YU81 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx8D3YU81 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rfx8D3YU81 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rfx8D3YU81 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Rfx8D3YU81 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Rfx8D3YU81 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Rfx8D3YU81 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rfx8D3YU81 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rfx8D3YU81 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx8D3YU81 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx8D3YU81 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms