Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.22□□□□□ -0.61
Col6a4A2AX52 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Mospd4-201ENSMUST00000180618 576 ntBASIC11.21□□□□□ -0.61
Col6a4A2AX52 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.21□□□□□ -0.61
Col6a4A2AX52 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.21□□□□□ -0.61
Col6a4A2AX52 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Col6a4A2AX52 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a4A2AX52 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a4A2AX52 Gm12566-201ENSMUST00000121479 359 ntBASIC11.21□□□□□ -0.62
Col6a4A2AX52 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a4A2AX52 Gm2260-201ENSMUST00000184965 657 ntBASIC11.21□□□□□ -0.62
Col6a4A2AX52 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.21□□□□□ -0.62
Col6a4A2AX52 Gm7593-201ENSMUST00000187246 644 ntBASIC11.21□□□□□ -0.62
Col6a4A2AX52 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.21□□□□□ -0.62
Col6a4A2AX52 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a4A2AX52 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a4A2AX52 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a4A2AX52 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.21□□□□□ -0.62
Col6a4A2AX52 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a4A2AX52 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a4A2AX52 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a4A2AX52 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a4A2AX52 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a4A2AX52 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a4A2AX52 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a4A2AX52 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a4A2AX52 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a4A2AX52 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Gm10434-201ENSMUST00000101158 471 ntBASIC11.2□□□□□ -0.62
Col6a4A2AX52 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Gm25732-201ENSMUST00000175168 60 ntBASIC11.2□□□□□ -0.62
Col6a4A2AX52 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Mir6979-201ENSMUST00000183927 56 ntBASIC11.2□□□□□ -0.62
Col6a4A2AX52 Gm7467-201ENSMUST00000185173 652 ntBASIC11.2□□□□□ -0.62
Col6a4A2AX52 Gm18212-201ENSMUST00000211678 889 ntBASIC11.2□□□□□ -0.62
Col6a4A2AX52 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.2□□□□□ -0.62
Col6a4A2AX52 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a4A2AX52 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms