Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm3365-201ENSMUST00000216296 1480 ntBASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ldb3-207ENSMUST00000227819 1499 ntBASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm43273-201ENSMUST00000199649 2594 ntBASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm31326-201ENSMUST00000191856 1048 ntBASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm42612-201ENSMUST00000197986 623 ntBASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm43170-201ENSMUST00000199827 612 ntBASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm6218-201ENSMUST00000219812 628 ntBASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm7730-201ENSMUST00000212486 454 ntBASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm17330-201ENSMUST00000221047 165 ntBASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm43134-201ENSMUST00000199434 1886 ntBASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms