Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Gm6745-201ENSMUST00000199216 526 ntBASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atp6ap1Q9R1Q9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Gm27701-201ENSMUST00000184498 110 ntBASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atp6ap1Q9R1Q9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atp6ap1Q9R1Q9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atp6ap1Q9R1Q9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm11918-201ENSMUST00000121660 179 ntBASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm28911-201ENSMUST00000188837 117 ntBASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm9908-201ENSMUST00000211534 448 ntBASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms