Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Gm18027-201ENSMUST00000218947 619 ntBASIC13.46□□□□□ -0.25
Sf3a3Q9D554 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Mir497b-201ENSMUST00000093601 125 ntBASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sf3a3Q9D554 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sf3a3Q9D554 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Sf3a3Q9D554 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sf3a3Q9D554 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sf3a3Q9D554 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sf3a3Q9D554 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sf3a3Q9D554 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Gm6973-201ENSMUST00000117080 721 ntBASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Gm13823-201ENSMUST00000119930 345 ntBASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Mir5131-201ENSMUST00000175426 93 ntBASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Sf3a3Q9D554 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms