Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Gm2423-201ENSMUST00000074863 733 ntBASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Gm5161-201ENSMUST00000075243 853 ntBASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Gm24447-201ENSMUST00000083977 338 ntBASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc3Q9CWU5 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gm12403-201ENSMUST00000121384 959 ntBASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gm26464-201ENSMUST00000157094 305 ntBASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gm5354-201ENSMUST00000182417 973 ntBASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.78□□□□□ -0.36
Khdc3Q9CWU5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms