Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Gm12485-201ENSMUST00000119641 291 ntBASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Gm25927-201ENSMUST00000175058 117 ntBASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Gm21854-201ENSMUST00000179901 471 ntBASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Mir6956-201ENSMUST00000183598 62 ntBASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Mir7684-201ENSMUST00000183858 60 ntBASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Gm27838-201ENSMUST00000184829 128 ntBASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
H2afb1Q9CQ70 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Gm12403-201ENSMUST00000121384 959 ntBASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Mir8102-201ENSMUST00000184148 139 ntBASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Gm5279-201ENSMUST00000199575 745 ntBASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms