Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.94□□□□□ -0.66
Prpf8Q99PV0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.94□□□□□ -0.66
Prpf8Q99PV0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.94□□□□□ -0.66
Prpf8Q99PV0 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Gm13123-201ENSMUST00000122173 492 ntBASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Gm29199-201ENSMUST00000187766 775 ntBASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Gm37922-201ENSMUST00000195596 455 ntBASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Gm12241-201ENSMUST00000118330 726 ntBASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Prpf8Q99PV0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Gm13342-201ENSMUST00000121055 207 ntBASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms