Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Gm29127-201ENSMUST00000188304 517 ntBASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd3Q99LE3 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.83□□□□□ -0.19
Lysmd3Q99LE3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Lysmd3Q99LE3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lysmd3Q99LE3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Mir1982-201ENSMUST00000157368 74 ntBASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd3Q99LE3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Gm14350-201ENSMUST00000116642 640 ntBASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Gm13226-201ENSMUST00000117838 404 ntBASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Gm12203-201ENSMUST00000118235 598 ntBASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Gm6447-201ENSMUST00000118905 835 ntBASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Gm12209-201ENSMUST00000120089 596 ntBASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd3Q99LE3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms