Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cstf1Q99LC2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Gm11591-201ENSMUST00000120063 702 ntBASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Mir6979-201ENSMUST00000183927 56 ntBASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms