Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Gm27838-201ENSMUST00000184829 128 ntBASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga11Q91XY8 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Gm14719-201ENSMUST00000121891 340 ntBASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Gm15487-201ENSMUST00000122373 465 ntBASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga11Q91XY8 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms