Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm1Q8VC85 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Gm12485-201ENSMUST00000119641 291 ntBASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.79□□□□□ -0.36
Lsm1Q8VC85 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm1Q8VC85 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms