Protein–RNA interactions for Protein: Q80VG1

Scml4, Sex comb on midleg-like protein 4, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scml4Q80VG1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scml4Q80VG1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Scml4Q80VG1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scml4Q80VG1 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scml4Q80VG1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scml4Q80VG1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scml4Q80VG1 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.42□□□□□ -0.58
Scml4Q80VG1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scml4Q80VG1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scml4Q80VG1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scml4Q80VG1 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Scml4Q80VG1 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scml4Q80VG1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scml4Q80VG1 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Scml4Q80VG1 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scml4Q80VG1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.41□□□□□ -0.58
Scml4Q80VG1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Gm15678-201ENSMUST00000117573 960 ntBASIC11.41□□□□□ -0.58
Scml4Q80VG1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scml4Q80VG1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.4□□□□□ -0.58
Scml4Q80VG1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.4□□□□□ -0.58
Scml4Q80VG1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.4□□□□□ -0.58
Scml4Q80VG1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Mir8117-201ENSMUST00000184773 107 ntBASIC11.4□□□□□ -0.58
Scml4Q80VG1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.4□□□□□ -0.58
Scml4Q80VG1 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.4□□□□□ -0.58
Scml4Q80VG1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scml4Q80VG1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms