Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Gm37922-201ENSMUST00000195596 455 ntBASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Gm25007-201ENSMUST00000083808 133 ntBASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Gm17420-201ENSMUST00000164753 153 ntBASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh19Q80TF3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Gm4271-201ENSMUST00000174444 973 ntBASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Gm43630-201ENSMUST00000201550 776 ntBASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh19Q80TF3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh19Q80TF3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms