Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.7□□□□□ -0.38
Otub1Q7TQI3 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Otub1Q7TQI3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Gm27306-201ENSMUST00000183970 107 ntBASIC12.69□□□□□ -0.38
Otub1Q7TQI3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Otub1Q7TQI3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Gm6912-201ENSMUST00000117218 544 ntBASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Otub1Q7TQI3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Otub1Q7TQI3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Otub1Q7TQI3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms