Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Scn4bQ7M729 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.99□□□□□ -0.33
Scn4bQ7M729 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Scn4bQ7M729 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.99□□□□□ -0.33
Scn4bQ7M729 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.99□□□□□ -0.33
Scn4bQ7M729 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn4bQ7M729 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.98□□□□□ -0.33
Scn4bQ7M729 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Gm28631-201ENSMUST00000190740 334 ntBASIC12.98□□□□□ -0.33
Scn4bQ7M729 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Scn4bQ7M729 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.98□□□□□ -0.33
Scn4bQ7M729 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Scn4bQ7M729 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.98□□□□□ -0.33
Scn4bQ7M729 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.98□□□□□ -0.33
Scn4bQ7M729 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn4bQ7M729 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.97□□□□□ -0.33
Scn4bQ7M729 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.97□□□□□ -0.33
Scn4bQ7M729 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Mir874-201ENSMUST00000104769 76 ntBASIC12.97□□□□□ -0.33
Scn4bQ7M729 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.97□□□□□ -0.33
Scn4bQ7M729 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.97□□□□□ -0.33
Scn4bQ7M729 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Gm42550-201ENSMUST00000201553 960 ntBASIC12.97□□□□□ -0.33
Scn4bQ7M729 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.97□□□□□ -0.33
Scn4bQ7M729 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn4bQ7M729 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms