Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim27Q62158 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.35■□□□□ 0.21
Trim27Q62158 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim27Q62158 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim27Q62158 Gm12928-201ENSMUST00000117115 573 ntBASIC16.35■□□□□ 0.21
Trim27Q62158 Gm45384-201ENSMUST00000210451 277 ntBASIC16.35■□□□□ 0.21
Trim27Q62158 Itm2b-204ENSMUST00000228637 783 ntBASIC16.35■□□□□ 0.21
Trim27Q62158 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim27Q62158 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim27Q62158 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim27Q62158 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim27Q62158 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim27Q62158 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim27Q62158 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim27Q62158 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim27Q62158 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim27Q62158 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim27Q62158 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim27Q62158 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim27Q62158 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim27Q62158 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim27Q62158 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Ssr1-203ENSMUST00000225246 1825 ntBASIC16.34■□□□□ 0.21
Trim27Q62158 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim27Q62158 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim27Q62158 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.34■□□□□ 0.21
Trim27Q62158 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.34■□□□□ 0.21
Trim27Q62158 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim27Q62158 Gm9908-201ENSMUST00000211534 448 ntBASIC16.34■□□□□ 0.21
Trim27Q62158 Gm18473-201ENSMUST00000220543 868 ntBASIC16.34■□□□□ 0.21
Trim27Q62158 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim27Q62158 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim27Q62158 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Trim27Q62158 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim27Q62158 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.33■□□□□ 0.21
Trim27Q62158 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim27Q62158 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim27Q62158 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim27Q62158 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim27Q62158 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim27Q62158 Gm7002-201ENSMUST00000221386 2165 ntBASIC16.33■□□□□ 0.2
Trim27Q62158 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim27Q62158 Gm11978-201ENSMUST00000122315 466 ntBASIC16.33■□□□□ 0.2
Trim27Q62158 Gm6152-201ENSMUST00000151704 340 ntBASIC16.33■□□□□ 0.2
Trim27Q62158 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.33■□□□□ 0.2
Trim27Q62158 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.33■□□□□ 0.2
Trim27Q62158 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.33■□□□□ 0.2
Trim27Q62158 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim27Q62158 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim27Q62158 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim27Q62158 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim27Q62158 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim27Q62158 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim27Q62158 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim27Q62158 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim27Q62158 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim27Q62158 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim27Q62158 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim27Q62158 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim27Q62158 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim27Q62158 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim27Q62158 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim27Q62158 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim27Q62158 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim27Q62158 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim27Q62158 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim27Q62158 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim27Q62158 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim27Q62158 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Trim27Q62158 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim27Q62158 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim27Q62158 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.32■□□□□ 0.2
Trim27Q62158 Gm12138-201ENSMUST00000122180 951 ntBASIC16.32■□□□□ 0.2
Trim27Q62158 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim27Q62158 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trim27Q62158 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim27Q62158 Gm8515-201ENSMUST00000194852 576 ntBASIC16.32■□□□□ 0.2
Trim27Q62158 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim27Q62158 Gm6745-201ENSMUST00000199216 526 ntBASIC16.32■□□□□ 0.2
Trim27Q62158 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim27Q62158 Gm8598-201ENSMUST00000221184 836 ntBASIC16.32■□□□□ 0.2
Trim27Q62158 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.32■□□□□ 0.2
Trim27Q62158 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms