Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.19□□□□□ -0.46
VcanQ62059 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
VcanQ62059 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
VcanQ62059 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
VcanQ62059 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC12.19□□□□□ -0.46
VcanQ62059 Gm3283-201ENSMUST00000199319 1350 ntBASIC12.19□□□□□ -0.46
VcanQ62059 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
VcanQ62059 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC12.19□□□□□ -0.46
VcanQ62059 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Gm29615-201ENSMUST00000185371 697 ntBASIC12.19□□□□□ -0.46
VcanQ62059 Gm28224-201ENSMUST00000186078 697 ntBASIC12.19□□□□□ -0.46
VcanQ62059 Gm29001-201ENSMUST00000186177 697 ntBASIC12.19□□□□□ -0.46
VcanQ62059 Gm28292-201ENSMUST00000186593 697 ntBASIC12.19□□□□□ -0.46
VcanQ62059 Gm28101-201ENSMUST00000187608 697 ntBASIC12.19□□□□□ -0.46
VcanQ62059 Gm29076-201ENSMUST00000187689 697 ntBASIC12.19□□□□□ -0.46
VcanQ62059 Gm28302-201ENSMUST00000187931 697 ntBASIC12.19□□□□□ -0.46
VcanQ62059 Gm28646-201ENSMUST00000188220 697 ntBASIC12.19□□□□□ -0.46
VcanQ62059 Gm28205-201ENSMUST00000189177 697 ntBASIC12.19□□□□□ -0.46
VcanQ62059 Gm29032-201ENSMUST00000189797 697 ntBASIC12.19□□□□□ -0.46
VcanQ62059 Gm28695-201ENSMUST00000190300 697 ntBASIC12.19□□□□□ -0.46
VcanQ62059 Gm37448-201ENSMUST00000192795 697 ntBASIC12.19□□□□□ -0.46
VcanQ62059 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.19□□□□□ -0.46
VcanQ62059 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.19□□□□□ -0.46
VcanQ62059 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
VcanQ62059 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VcanQ62059 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
VcanQ62059 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
VcanQ62059 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
VcanQ62059 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
VcanQ62059 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VcanQ62059 Gm12058-201ENSMUST00000118614 437 ntBASIC12.18□□□□□ -0.46
VcanQ62059 Gm11978-201ENSMUST00000122315 466 ntBASIC12.18□□□□□ -0.46
VcanQ62059 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.18□□□□□ -0.46
VcanQ62059 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.18□□□□□ -0.46
VcanQ62059 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
VcanQ62059 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VcanQ62059 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VcanQ62059 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VcanQ62059 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
VcanQ62059 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VcanQ62059 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VcanQ62059 Gm23949-201ENSMUST00000104027 127 ntBASIC12.18□□□□□ -0.46
VcanQ62059 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
VcanQ62059 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.18□□□□□ -0.46
VcanQ62059 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VcanQ62059 Gm12218-201ENSMUST00000117666 399 ntBASIC12.18□□□□□ -0.46
VcanQ62059 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.18□□□□□ -0.46
VcanQ62059 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.18□□□□□ -0.46
VcanQ62059 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
VcanQ62059 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VcanQ62059 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VcanQ62059 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VcanQ62059 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
VcanQ62059 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VcanQ62059 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.18□□□□□ -0.46
VcanQ62059 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.18□□□□□ -0.46
VcanQ62059 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
VcanQ62059 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.18□□□□□ -0.46
VcanQ62059 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.18□□□□□ -0.46
VcanQ62059 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VcanQ62059 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.18□□□□□ -0.46
VcanQ62059 Gm13937-201ENSMUST00000121000 988 ntBASIC12.18□□□□□ -0.46
VcanQ62059 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VcanQ62059 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
VcanQ62059 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.18□□□□□ -0.46
VcanQ62059 Gm9139-201ENSMUST00000218817 700 ntBASIC12.18□□□□□ -0.46
VcanQ62059 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms