Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.6□□□□□ -0.07
Col11a1Q61245 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Col11a1Q61245 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.59□□□□□ -0.07
Col11a1Q61245 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.59□□□□□ -0.07
Col11a1Q61245 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.59□□□□□ -0.07
Col11a1Q61245 Gm27627-201ENSMUST00000183644 150 ntBASIC14.59□□□□□ -0.07
Col11a1Q61245 Gm43916-201ENSMUST00000205062 967 ntBASIC14.59□□□□□ -0.07
Col11a1Q61245 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Col11a1Q61245 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Col11a1Q61245 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Col11a1Q61245 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Col11a1Q61245 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.59□□□□□ -0.07
Col11a1Q61245 Gm13315-201ENSMUST00000120376 991 ntBASIC14.59□□□□□ -0.07
Col11a1Q61245 Gm5616-201ENSMUST00000165252 384 ntBASIC14.59□□□□□ -0.07
Col11a1Q61245 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Gm8741-201ENSMUST00000174736 384 ntBASIC14.59□□□□□ -0.07
Col11a1Q61245 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.59□□□□□ -0.07
Col11a1Q61245 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col11a1Q61245 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Col11a1Q61245 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Col11a1Q61245 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Col11a1Q61245 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.58□□□□□ -0.08
Col11a1Q61245 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Col11a1Q61245 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Col11a1Q61245 Gm12165-201ENSMUST00000117047 342 ntBASIC14.58□□□□□ -0.08
Col11a1Q61245 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.58□□□□□ -0.08
Col11a1Q61245 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.58□□□□□ -0.08
Col11a1Q61245 Mir7221-201ENSMUST00000184009 72 ntBASIC14.58□□□□□ -0.08
Col11a1Q61245 Gm45598-202ENSMUST00000210719 986 ntBASIC14.58□□□□□ -0.08
Col11a1Q61245 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.58□□□□□ -0.08
Col11a1Q61245 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.58□□□□□ -0.08
Col11a1Q61245 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Col11a1Q61245 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Col11a1Q61245 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Col11a1Q61245 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Col11a1Q61245 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Col11a1Q61245 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a1Q61245 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a1Q61245 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col11a1Q61245 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a1Q61245 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms