Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fam196aQ3USH1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fam196aQ3USH1 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.35□□□□□ -0.27
Fam196aQ3USH1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Snord83b-201ENSMUST00000104546 94 ntBASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Gm15131-201ENSMUST00000119124 595 ntBASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Gm11597-201ENSMUST00000121423 964 ntBASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam196aQ3USH1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Fam196aQ3USH1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Fam196aQ3USH1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Fam196aQ3USH1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Gm44126-201ENSMUST00000204831 514 ntBASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Gm45219-201ENSMUST00000205602 465 ntBASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fam196aQ3USH1 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Gm8194-201ENSMUST00000159783 859 ntBASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Gm2445-201ENSMUST00000182798 989 ntBASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Gm5904-201ENSMUST00000210286 865 ntBASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Spcs1-203ENSMUST00000226374 592 ntBASIC13.32□□□□□ -0.28
Fam196aQ3USH1 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam196aQ3USH1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms