Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col19a1Q0VF58 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.1□□□□□ -0.15
Col19a1Q0VF58 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col19a1Q0VF58 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col19a1Q0VF58 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col19a1Q0VF58 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col19a1Q0VF58 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col19a1Q0VF58 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col19a1Q0VF58 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col19a1Q0VF58 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col19a1Q0VF58 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Col19a1Q0VF58 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col19a1Q0VF58 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col19a1Q0VF58 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col19a1Q0VF58 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col19a1Q0VF58 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.08□□□□□ -0.15
Col19a1Q0VF58 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Gm13047-201ENSMUST00000117116 815 ntBASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Gm12029-201ENSMUST00000120073 832 ntBASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Gm10051-201ENSMUST00000145209 414 ntBASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 AC124457.1-201ENSMUST00000198845 120 ntBASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Gm17812-201ENSMUST00000204935 318 ntBASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col19a1Q0VF58 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col19a1Q0VF58 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col19a1Q0VF58 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col19a1Q0VF58 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Col19a1Q0VF58 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col19a1Q0VF58 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col19a1Q0VF58 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col19a1Q0VF58 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col19a1Q0VF58 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms