Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scn1bP97952 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scn1bP97952 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Scn1bP97952 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.17□□□□□ -0.46
Scn1bP97952 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.17□□□□□ -0.46
Scn1bP97952 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.17□□□□□ -0.46
Scn1bP97952 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.17□□□□□ -0.46
Scn1bP97952 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1bP97952 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.16□□□□□ -0.46
Scn1bP97952 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Scn1bP97952 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Scn1bP97952 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.16□□□□□ -0.46
Scn1bP97952 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
Scn1bP97952 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.16□□□□□ -0.46
Scn1bP97952 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.16□□□□□ -0.46
Scn1bP97952 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.16□□□□□ -0.46
Scn1bP97952 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.16□□□□□ -0.46
Scn1bP97952 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.16□□□□□ -0.46
Scn1bP97952 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Scn1bP97952 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.16□□□□□ -0.46
Scn1bP97952 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.16□□□□□ -0.46
Scn1bP97952 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.16□□□□□ -0.46
Scn1bP97952 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scn1bP97952 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Scn1bP97952 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.16□□□□□ -0.46
Scn1bP97952 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scn1bP97952 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Scn1bP97952 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1bP97952 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Scn1bP97952 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Scn1bP97952 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.15□□□□□ -0.46
Scn1bP97952 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Scn1bP97952 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Scn1bP97952 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Scn1bP97952 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Gm15957-201ENSMUST00000118893 974 ntBASIC12.15□□□□□ -0.46
Scn1bP97952 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.15□□□□□ -0.46
Scn1bP97952 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.15□□□□□ -0.46
Scn1bP97952 Mir3113-201ENSMUST00000175478 76 ntBASIC12.15□□□□□ -0.46
Scn1bP97952 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.15□□□□□ -0.46
Scn1bP97952 Gm29741-201ENSMUST00000192667 421 ntBASIC12.15□□□□□ -0.46
Scn1bP97952 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.15□□□□□ -0.46
Scn1bP97952 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.15□□□□□ -0.46
Scn1bP97952 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.15□□□□□ -0.46
Scn1bP97952 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Scn1bP97952 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Scn1bP97952 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Scn1bP97952 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms