Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gfra1P97785 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gfra1P97785 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Gfra1P97785 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.02□□□□□ -0.64
Gfra1P97785 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.02□□□□□ -0.64
Gfra1P97785 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gfra1P97785 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Gfra1P97785 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gfra1P97785 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.02□□□□□ -0.65
Gfra1P97785 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.02□□□□□ -0.65
Gfra1P97785 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Gm12390-201ENSMUST00000117897 397 ntBASIC11.02□□□□□ -0.65
Gfra1P97785 Gm5687-201ENSMUST00000118252 640 ntBASIC11.02□□□□□ -0.65
Gfra1P97785 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Gfra1P97785 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Gfra1P97785 Gm8652-201ENSMUST00000181363 964 ntBASIC11.02□□□□□ -0.65
Gfra1P97785 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Gm29649-201ENSMUST00000185649 419 ntBASIC11.02□□□□□ -0.65
Gfra1P97785 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.02□□□□□ -0.65
Gfra1P97785 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.02□□□□□ -0.65
Gfra1P97785 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.02□□□□□ -0.65
Gfra1P97785 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Gfra1P97785 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.02□□□□□ -0.65
Gfra1P97785 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Gfra1P97785 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Gfra1P97785 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.02□□□□□ -0.65
Gfra1P97785 Gm16372-201ENSMUST00000073088 450 ntBASIC11.02□□□□□ -0.65
Gfra1P97785 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Gfra1P97785 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
Gfra1P97785 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.02□□□□□ -0.65
Gfra1P97785 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Gfra1P97785 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.02□□□□□ -0.65
Gfra1P97785 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.02□□□□□ -0.65
Gfra1P97785 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gfra1P97785 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.01□□□□□ -0.65
Gfra1P97785 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.01□□□□□ -0.65
Gfra1P97785 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Gfra1P97785 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.01□□□□□ -0.65
Gfra1P97785 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.01□□□□□ -0.65
Gfra1P97785 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.01□□□□□ -0.65
Gfra1P97785 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.01□□□□□ -0.65
Gfra1P97785 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.01□□□□□ -0.65
Gfra1P97785 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Gfra1P97785 Gm24196-201ENSMUST00000179161 110 ntBASIC11.01□□□□□ -0.65
Gfra1P97785 Gm29608-201ENSMUST00000190444 463 ntBASIC11.01□□□□□ -0.65
Gfra1P97785 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.01□□□□□ -0.65
Gfra1P97785 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Gfra1P97785 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Gfra1P97785 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.01□□□□□ -0.65
Gfra1P97785 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Gfra1P97785 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.01□□□□□ -0.65
Gfra1P97785 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gfra1P97785 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms