Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim43cP86449 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.49□□□□□ -0.09
Trim43cP86449 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.49□□□□□ -0.09
Trim43cP86449 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
Trim43cP86449 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Gm12928-201ENSMUST00000117115 573 ntBASIC14.49□□□□□ -0.09
Trim43cP86449 Gm11978-201ENSMUST00000122315 466 ntBASIC14.49□□□□□ -0.09
Trim43cP86449 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trim43cP86449 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.49□□□□□ -0.09
Trim43cP86449 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Trim43cP86449 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trim43cP86449 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trim43cP86449 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim43cP86449 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.49□□□□□ -0.09
Trim43cP86449 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim43cP86449 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43cP86449 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.48□□□□□ -0.09
Trim43cP86449 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.48□□□□□ -0.09
Trim43cP86449 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim43cP86449 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Gm8598-201ENSMUST00000221184 836 ntBASIC14.48□□□□□ -0.09
Trim43cP86449 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trim43cP86449 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trim43cP86449 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Trim43cP86449 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim43cP86449 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim43cP86449 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim43cP86449 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trim43cP86449 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim43cP86449 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trim43cP86449 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim43cP86449 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trim43cP86449 Gm14350-201ENSMUST00000116642 640 ntBASIC14.47□□□□□ -0.09
Trim43cP86449 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim43cP86449 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim43cP86449 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.47□□□□□ -0.09
Trim43cP86449 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.47□□□□□ -0.09
Trim43cP86449 Gm18473-201ENSMUST00000220543 868 ntBASIC14.47□□□□□ -0.09
Trim43cP86449 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.47□□□□□ -0.09
Trim43cP86449 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trim43cP86449 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim43cP86449 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43cP86449 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms