Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.89□□□□□ -0.51
SgcbP82349 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.89□□□□□ -0.51
SgcbP82349 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
SgcbP82349 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.89□□□□□ -0.51
SgcbP82349 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.89□□□□□ -0.51
SgcbP82349 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Gm2495-201ENSMUST00000191160 466 ntBASIC11.89□□□□□ -0.51
SgcbP82349 Itm2b-204ENSMUST00000228637 783 ntBASIC11.89□□□□□ -0.51
SgcbP82349 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
SgcbP82349 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.89□□□□□ -0.51
SgcbP82349 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.89□□□□□ -0.51
SgcbP82349 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
SgcbP82349 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SgcbP82349 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
SgcbP82349 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.88□□□□□ -0.51
SgcbP82349 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
SgcbP82349 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.88□□□□□ -0.51
SgcbP82349 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SgcbP82349 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Gm27486-201ENSMUST00000184923 80 ntBASIC11.88□□□□□ -0.51
SgcbP82349 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.88□□□□□ -0.51
SgcbP82349 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.88□□□□□ -0.51
SgcbP82349 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
SgcbP82349 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
SgcbP82349 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.88□□□□□ -0.51
SgcbP82349 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
SgcbP82349 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
SgcbP82349 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.88□□□□□ -0.51
SgcbP82349 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SgcbP82349 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.87□□□□□ -0.51
SgcbP82349 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.87□□□□□ -0.51
SgcbP82349 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
SgcbP82349 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
SgcbP82349 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
SgcbP82349 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SgcbP82349 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
SgcbP82349 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Gm4984-201ENSMUST00000115987 360 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms