Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Matn2-203ENSMUST00000226766 3252 ntBASIC12.4□□□□□ -0.42
SgcdP82347 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.4□□□□□ -0.42
SgcdP82347 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SgcdP82347 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SgcdP82347 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
SgcdP82347 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
SgcdP82347 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SgcdP82347 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SgcdP82347 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.39□□□□□ -0.43
SgcdP82347 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.39□□□□□ -0.43
SgcdP82347 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.39□□□□□ -0.43
SgcdP82347 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Gm2445-201ENSMUST00000182798 989 ntBASIC12.39□□□□□ -0.43
SgcdP82347 Mir8102-201ENSMUST00000184148 139 ntBASIC12.39□□□□□ -0.43
SgcdP82347 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.39□□□□□ -0.43
SgcdP82347 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.39□□□□□ -0.43
SgcdP82347 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SgcdP82347 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcdP82347 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SgcdP82347 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.39□□□□□ -0.43
SgcdP82347 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.38□□□□□ -0.43
SgcdP82347 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.38□□□□□ -0.43
SgcdP82347 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.38□□□□□ -0.43
SgcdP82347 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.38□□□□□ -0.43
SgcdP82347 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Gm11543-201ENSMUST00000120758 370 ntBASIC12.38□□□□□ -0.43
SgcdP82347 Gm12882-201ENSMUST00000121696 517 ntBASIC12.38□□□□□ -0.43
SgcdP82347 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SgcdP82347 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.38□□□□□ -0.43
SgcdP82347 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.38□□□□□ -0.43
SgcdP82347 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SgcdP82347 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.38□□□□□ -0.43
SgcdP82347 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SgcdP82347 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.38□□□□□ -0.43
SgcdP82347 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcdP82347 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms