Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six5P70178 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Six5P70178 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Six5P70178 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six5P70178 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Six5P70178 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Six5P70178 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Six5P70178 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Six5P70178 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.48□□□□□ -0.41
Six5P70178 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Six5P70178 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.48□□□□□ -0.41
Six5P70178 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Mir7221-201ENSMUST00000184009 72 ntBASIC12.48□□□□□ -0.41
Six5P70178 Gm29608-201ENSMUST00000190444 463 ntBASIC12.48□□□□□ -0.41
Six5P70178 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Gm45841-201ENSMUST00000207700 164 ntBASIC12.48□□□□□ -0.41
Six5P70178 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Six5P70178 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Six5P70178 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Six5P70178 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Six5P70178 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.48□□□□□ -0.41
Six5P70178 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Six5P70178 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Six5P70178 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.47□□□□□ -0.41
Six5P70178 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Six5P70178 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.47□□□□□ -0.41
Six5P70178 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Six5P70178 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Six5P70178 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.47□□□□□ -0.41
Six5P70178 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Six5P70178 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.47□□□□□ -0.41
Six5P70178 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.47□□□□□ -0.41
Six5P70178 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.47□□□□□ -0.41
Six5P70178 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.47□□□□□ -0.41
Six5P70178 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.47□□□□□ -0.41
Six5P70178 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.47□□□□□ -0.41
Six5P70178 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.47□□□□□ -0.41
Six5P70178 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Six5P70178 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Six5P70178 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Six5P70178 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six5P70178 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.46□□□□□ -0.41
Six5P70178 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Six5P70178 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Six5P70178 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six5P70178 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Six5P70178 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.46□□□□□ -0.41
Six5P70178 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.46□□□□□ -0.41
Six5P70178 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Six5P70178 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six5P70178 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six5P70178 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.46□□□□□ -0.41
Six5P70178 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six5P70178 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms