Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Usp46P62069 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp46P62069 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp46P62069 Gm6152-201ENSMUST00000151704 340 ntBASIC14.04□□□□□ -0.16
Usp46P62069 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.04□□□□□ -0.16
Usp46P62069 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.04□□□□□ -0.16
Usp46P62069 Gm27847-201ENSMUST00000183711 107 ntBASIC14.04□□□□□ -0.16
Usp46P62069 Gm27375-201ENSMUST00000183799 107 ntBASIC14.04□□□□□ -0.16
Usp46P62069 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Usp46P62069 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp46P62069 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp46P62069 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.04□□□□□ -0.16
Usp46P62069 Gm26315-201ENSMUST00000083890 321 ntBASIC14.04□□□□□ -0.16
Usp46P62069 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.04□□□□□ -0.16
Usp46P62069 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp46P62069 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp46P62069 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp46P62069 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Usp46P62069 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp46P62069 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp46P62069 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Usp46P62069 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp46P62069 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp46P62069 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Gm5687-201ENSMUST00000118252 640 ntBASIC14.03□□□□□ -0.16
Usp46P62069 Gm11803-201ENSMUST00000119966 444 ntBASIC14.03□□□□□ -0.16
Usp46P62069 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC14.03□□□□□ -0.16
Usp46P62069 Proscos-202ENSMUST00000178990 666 ntBASIC14.03□□□□□ -0.16
Usp46P62069 Gm24196-201ENSMUST00000179161 110 ntBASIC14.03□□□□□ -0.16
Usp46P62069 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp46P62069 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Gm38144-201ENSMUST00000192790 465 ntBASIC14.03□□□□□ -0.16
Usp46P62069 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Usp46P62069 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Usp46P62069 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
Usp46P62069 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usp46P62069 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp46P62069 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Usp46P62069 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
Usp46P62069 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Usp46P62069 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp46P62069 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Usp46P62069 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Usp46P62069 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp46P62069 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp46P62069 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Usp46P62069 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp46P62069 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp46P62069 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp46P62069 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp46P62069 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp46P62069 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.02□□□□□ -0.16
Usp46P62069 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Usp46P62069 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Usp46P62069 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Usp46P62069 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms