Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lmo4P61969 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Lmo4P61969 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.73□□□□□ -0.69
Lmo4P61969 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lmo4P61969 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lmo4P61969 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lmo4P61969 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lmo4P61969 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lmo4P61969 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lmo4P61969 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lmo4P61969 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lmo4P61969 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Lmo4P61969 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.72□□□□□ -0.69
Lmo4P61969 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Gm13297-201ENSMUST00000120205 934 ntBASIC10.72□□□□□ -0.69
Lmo4P61969 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Gm38341-201ENSMUST00000195357 515 ntBASIC10.72□□□□□ -0.69
Lmo4P61969 Gm6334-201ENSMUST00000207083 228 ntBASIC10.72□□□□□ -0.69
Lmo4P61969 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Lmo4P61969 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Lmo4P61969 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Lmo4P61969 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Lmo4P61969 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Lmo4P61969 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Lmo4P61969 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC10.72□□□□□ -0.69
Lmo4P61969 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Lmo4P61969 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.72□□□□□ -0.69
Lmo4P61969 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Lmo4P61969 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Lmo4P61969 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Lmo4P61969 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.72□□□□□ -0.69
Lmo4P61969 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Lmo4P61969 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.72□□□□□ -0.69
Lmo4P61969 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.72□□□□□ -0.69
Lmo4P61969 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Lmo4P61969 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lmo4P61969 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Lmo4P61969 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 Gm15370-201ENSMUST00000117158 253 ntBASIC10.71□□□□□ -0.69
Lmo4P61969 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.71□□□□□ -0.69
Lmo4P61969 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.71□□□□□ -0.69
Lmo4P61969 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Lmo4P61969 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Lmo4P61969 Mospd4-201ENSMUST00000180618 576 ntBASIC10.71□□□□□ -0.69
Lmo4P61969 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.71□□□□□ -0.69
Lmo4P61969 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Lmo4P61969 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lmo4P61969 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.71□□□□□ -0.69
Lmo4P61969 Gm7046-201ENSMUST00000221351 977 ntBASIC10.71□□□□□ -0.69
Lmo4P61969 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.71□□□□□ -0.69
Lmo4P61969 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms