Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.53□□□□□ -0.88
Cks1bP61025 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Gm13036-201ENSMUST00000117799 748 ntBASIC9.53□□□□□ -0.88
Cks1bP61025 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC9.53□□□□□ -0.88
Cks1bP61025 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Mir8098-201ENSMUST00000184011 137 ntBASIC9.53□□□□□ -0.88
Cks1bP61025 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC9.53□□□□□ -0.88
Cks1bP61025 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC9.53□□□□□ -0.88
Cks1bP61025 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC9.53□□□□□ -0.88
Cks1bP61025 Gm45747-201ENSMUST00000212203 999 ntBASIC9.53□□□□□ -0.88
Cks1bP61025 AC102291.3-201ENSMUST00000226566 405 ntBASIC9.53□□□□□ -0.88
Cks1bP61025 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC9.53□□□□□ -0.88
Cks1bP61025 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.53□□□□□ -0.88
Cks1bP61025 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC9.53□□□□□ -0.88
Cks1bP61025 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cks1bP61025 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cks1bP61025 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cks1bP61025 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cks1bP61025 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cks1bP61025 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cks1bP61025 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cks1bP61025 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cks1bP61025 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC9.52□□□□□ -0.89
Cks1bP61025 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC9.52□□□□□ -0.89
Cks1bP61025 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1bP61025 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Cks1bP61025 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Cks1bP61025 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1bP61025 Gm13410-201ENSMUST00000117058 1415 ntBASIC9.52□□□□□ -0.89
Cks1bP61025 Gm9103-201ENSMUST00000119371 405 ntBASIC9.52□□□□□ -0.89
Cks1bP61025 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1bP61025 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1bP61025 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Cks1bP61025 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Cks1bP61025 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1bP61025 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC9.52□□□□□ -0.89
Cks1bP61025 AC161829.1-201ENSMUST00000220298 281 ntBASIC9.52□□□□□ -0.89
Cks1bP61025 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1bP61025 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1bP61025 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC9.52□□□□□ -0.89
Cks1bP61025 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1bP61025 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1bP61025 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1bP61025 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1bP61025 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.52□□□□□ -0.89
Cks1bP61025 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
Cks1bP61025 Gm11873-201ENSMUST00000117877 1304 ntBASIC9.52□□□□□ -0.89
Cks1bP61025 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1bP61025 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.52□□□□□ -0.89
Cks1bP61025 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC9.52□□□□□ -0.89
Cks1bP61025 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1bP61025 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1bP61025 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1bP61025 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1bP61025 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1bP61025 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1bP61025 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1bP61025 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1bP61025 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cks1bP61025 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC9.51□□□□□ -0.89
Cks1bP61025 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Cks1bP61025 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1bP61025 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1bP61025 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1bP61025 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1bP61025 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Cks1bP61025 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1bP61025 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cks1bP61025 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1bP61025 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cks1bP61025 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1bP61025 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms