Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh5P55284 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh5P55284 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh5P55284 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh5P55284 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh5P55284 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh5P55284 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh5P55284 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh5P55284 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdh5P55284 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdh5P55284 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Gm15393-201ENSMUST00000120499 219 ntBASIC13.01□□□□□ -0.33
Cdh5P55284 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdh5P55284 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdh5P55284 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdh5P55284 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdh5P55284 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdh5P55284 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdh5P55284 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh5P55284 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Cdh5P55284 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.01□□□□□ -0.33
Cdh5P55284 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh5P55284 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13□□□□□ -0.33
Cdh5P55284 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Gm10176-201ENSMUST00000159707 2264 ntBASIC13□□□□□ -0.33
Cdh5P55284 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdh5P55284 Gm17435-202ENSMUST00000212699 1998 ntBASIC13□□□□□ -0.33
Cdh5P55284 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13□□□□□ -0.33
Cdh5P55284 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdh5P55284 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13□□□□□ -0.33
Cdh5P55284 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cdh5P55284 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13□□□□□ -0.33
Cdh5P55284 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Cdh5P55284 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Cdh5P55284 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13□□□□□ -0.33
Cdh5P55284 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13□□□□□ -0.33
Cdh5P55284 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Cdh5P55284 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cdh5P55284 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdh5P55284 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Cdh5P55284 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh5P55284 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdh5P55284 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh5P55284 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdh5P55284 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh5P55284 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdh5P55284 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh5P55284 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh5P55284 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh5P55284 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh5P55284 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdh5P55284 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdh5P55284 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh5P55284 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh5P55284 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh5P55284 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh5P55284 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdh5P55284 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdh5P55284 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh5P55284 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms