Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm23218-201ENSMUST00000158124 276 ntBASIC12.88□□□□□ -0.35
Lbx1P52955 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.88□□□□□ -0.35
Lbx1P52955 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.88□□□□□ -0.35
Lbx1P52955 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Lbx1P52955 Mt1-202ENSMUST00000211807 1085 ntBASIC12.88□□□□□ -0.35
Lbx1P52955 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.88□□□□□ -0.35
Lbx1P52955 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.88□□□□□ -0.35
Lbx1P52955 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Lbx1P52955 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.88□□□□□ -0.35
Lbx1P52955 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Lbx1P52955 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lbx1P52955 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lbx1P52955 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lbx1P52955 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.87□□□□□ -0.35
Lbx1P52955 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.87□□□□□ -0.35
Lbx1P52955 Rmrp-201ENSMUST00000157463 271 ntBASIC12.87□□□□□ -0.35
Lbx1P52955 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.87□□□□□ -0.35
Lbx1P52955 Gm43752-201ENSMUST00000198475 697 ntBASIC12.87□□□□□ -0.35
Lbx1P52955 Gm45224-201ENSMUST00000208203 414 ntBASIC12.87□□□□□ -0.35
Lbx1P52955 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.87□□□□□ -0.35
Lbx1P52955 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.87□□□□□ -0.35
Lbx1P52955 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.87□□□□□ -0.35
Lbx1P52955 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.87□□□□□ -0.35
Lbx1P52955 Gm10076-201ENSMUST00000073238 384 ntBASIC12.87□□□□□ -0.35
Lbx1P52955 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lbx1P52955 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.87□□□□□ -0.35
Lbx1P52955 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lbx1P52955 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lbx1P52955 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.86□□□□□ -0.35
Lbx1P52955 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lbx1P52955 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.86□□□□□ -0.35
Lbx1P52955 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Gm3793-201ENSMUST00000204973 672 ntBASIC12.86□□□□□ -0.35
Lbx1P52955 Gm45550-201ENSMUST00000209380 946 ntBASIC12.86□□□□□ -0.35
Lbx1P52955 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.86□□□□□ -0.35
Lbx1P52955 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Lbx1P52955 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Lbx1P52955 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.86□□□□□ -0.35
Lbx1P52955 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lbx1P52955 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lbx1P52955 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lbx1P52955 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.86□□□□□ -0.35
Lbx1P52955 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lbx1P52955 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms