Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Gm25911-201ENSMUST00000157621 56 ntBASIC11.04□□□□□ -0.64
Nkx2-1P50220 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.04□□□□□ -0.64
Nkx2-1P50220 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.04□□□□□ -0.64
Nkx2-1P50220 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.04□□□□□ -0.64
Nkx2-1P50220 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.04□□□□□ -0.64
Nkx2-1P50220 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.04□□□□□ -0.64
Nkx2-1P50220 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.04□□□□□ -0.64
Nkx2-1P50220 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Nkx2-1P50220 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkx2-1P50220 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.03□□□□□ -0.64
Nkx2-1P50220 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Gm15678-201ENSMUST00000117573 960 ntBASIC11.03□□□□□ -0.64
Nkx2-1P50220 Gm11745-201ENSMUST00000121669 448 ntBASIC11.03□□□□□ -0.64
Nkx2-1P50220 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.03□□□□□ -0.64
Nkx2-1P50220 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Gm2756-201ENSMUST00000195851 400 ntBASIC11.03□□□□□ -0.64
Nkx2-1P50220 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.03□□□□□ -0.64
Nkx2-1P50220 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.03□□□□□ -0.64
Nkx2-1P50220 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-1P50220 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx2-1P50220 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx2-1P50220 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx2-1P50220 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Nkx2-1P50220 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.02□□□□□ -0.65
Nkx2-1P50220 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.02□□□□□ -0.65
Nkx2-1P50220 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-1P50220 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms