Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.48□□□□□ -0.41
Sox2P48432 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.48□□□□□ -0.41
Sox2P48432 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.48□□□□□ -0.41
Sox2P48432 Gm44335-201ENSMUST00000196879 141 ntBASIC12.48□□□□□ -0.41
Sox2P48432 Gm44297-201ENSMUST00000198304 141 ntBASIC12.48□□□□□ -0.41
Sox2P48432 Gm44346-201ENSMUST00000198851 141 ntBASIC12.48□□□□□ -0.41
Sox2P48432 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.48□□□□□ -0.41
Sox2P48432 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.48□□□□□ -0.41
Sox2P48432 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sox2P48432 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Sox2P48432 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.48□□□□□ -0.41
Sox2P48432 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sox2P48432 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sox2P48432 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.47□□□□□ -0.41
Sox2P48432 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.47□□□□□ -0.41
Sox2P48432 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.47□□□□□ -0.41
Sox2P48432 Mir874-201ENSMUST00000104769 76 ntBASIC12.47□□□□□ -0.41
Sox2P48432 Gm4995-201ENSMUST00000117247 432 ntBASIC12.47□□□□□ -0.41
Sox2P48432 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sox2P48432 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.47□□□□□ -0.41
Sox2P48432 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.47□□□□□ -0.41
Sox2P48432 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sox2P48432 Gm43474-201ENSMUST00000196415 774 ntBASIC12.47□□□□□ -0.41
Sox2P48432 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Sox2P48432 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sox2P48432 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sox2P48432 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.47□□□□□ -0.41
Sox2P48432 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Sox2P48432 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox2P48432 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.46□□□□□ -0.41
Sox2P48432 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox2P48432 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.46□□□□□ -0.41
Sox2P48432 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox2P48432 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox2P48432 Gm5264-201ENSMUST00000190584 848 ntBASIC12.46□□□□□ -0.41
Sox2P48432 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms