Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxa1P35582 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxa1P35582 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Foxa1P35582 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxa1P35582 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxa1P35582 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxa1P35582 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Foxa1P35582 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.32□□□□□ -0.44
Foxa1P35582 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Foxa1P35582 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.32□□□□□ -0.44
Foxa1P35582 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Foxa1P35582 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.32□□□□□ -0.44
Foxa1P35582 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.32□□□□□ -0.44
Foxa1P35582 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Gm8463-201ENSMUST00000208573 613 ntBASIC12.32□□□□□ -0.44
Foxa1P35582 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.32□□□□□ -0.44
Foxa1P35582 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.32□□□□□ -0.44
Foxa1P35582 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Foxa1P35582 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxa1P35582 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Foxa1P35582 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Foxa1P35582 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.31□□□□□ -0.44
Foxa1P35582 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Foxa1P35582 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Foxa1P35582 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.31□□□□□ -0.44
Foxa1P35582 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Foxa1P35582 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.31□□□□□ -0.44
Foxa1P35582 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.31□□□□□ -0.44
Foxa1P35582 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.31□□□□□ -0.44
Foxa1P35582 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.31□□□□□ -0.44
Foxa1P35582 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Gm7653-201ENSMUST00000214567 508 ntBASIC12.31□□□□□ -0.44
Foxa1P35582 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.31□□□□□ -0.44
Foxa1P35582 Itm2b-204ENSMUST00000228637 783 ntBASIC12.31□□□□□ -0.44
Foxa1P35582 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.31□□□□□ -0.44
Foxa1P35582 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.31□□□□□ -0.44
Foxa1P35582 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxa1P35582 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.3□□□□□ -0.44
Foxa1P35582 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Foxa1P35582 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.3□□□□□ -0.44
Foxa1P35582 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxa1P35582 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.3□□□□□ -0.44
Foxa1P35582 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.3□□□□□ -0.44
Foxa1P35582 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms