Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs1P35441 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Thbs1P35441 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs1P35441 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Thbs1P35441 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs1P35441 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.36□□□□□ -0.43
Thbs1P35441 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.36□□□□□ -0.43
Thbs1P35441 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs1P35441 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs1P35441 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs1P35441 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs1P35441 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs1P35441 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs1P35441 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Thbs1P35441 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs1P35441 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs1P35441 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Thbs1P35441 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Thbs1P35441 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.35□□□□□ -0.43
Thbs1P35441 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Thbs1P35441 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.35□□□□□ -0.43
Thbs1P35441 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Thbs1P35441 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Thbs1P35441 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.35□□□□□ -0.43
Thbs1P35441 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.35□□□□□ -0.43
Thbs1P35441 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Thbs1P35441 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Gm16215-201ENSMUST00000161990 637 ntBASIC12.35□□□□□ -0.43
Thbs1P35441 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Thbs1P35441 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.35□□□□□ -0.43
Thbs1P35441 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.35□□□□□ -0.43
Thbs1P35441 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.35□□□□□ -0.43
Thbs1P35441 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.35□□□□□ -0.43
Thbs1P35441 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.35□□□□□ -0.43
Thbs1P35441 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.35□□□□□ -0.43
Thbs1P35441 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Thbs1P35441 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs1P35441 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.35□□□□□ -0.43
Thbs1P35441 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Thbs1P35441 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Thbs1P35441 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Thbs1P35441 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Thbs1P35441 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Thbs1P35441 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Thbs1P35441 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.34□□□□□ -0.43
Thbs1P35441 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.34□□□□□ -0.43
Thbs1P35441 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Thbs1P35441 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.34□□□□□ -0.43
Thbs1P35441 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Thbs1P35441 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Thbs1P35441 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC12.34□□□□□ -0.43
Thbs1P35441 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.34□□□□□ -0.43
Thbs1P35441 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.34□□□□□ -0.43
Thbs1P35441 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.34□□□□□ -0.43
Thbs1P35441 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Thbs1P35441 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.34□□□□□ -0.43
Thbs1P35441 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs1P35441 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms