Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vcam1P29533 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcam1P29533 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.23■□□□□ 0.03
Vcam1P29533 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vcam1P29533 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.23■□□□□ 0.03
Vcam1P29533 Gm21769-201ENSMUST00000211922 111 ntBASIC15.23■□□□□ 0.03
Vcam1P29533 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Vcam1P29533 Morn2-202ENSMUST00000227729 656 ntBASIC15.23■□□□□ 0.03
Vcam1P29533 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcam1P29533 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Vcam1P29533 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcam1P29533 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcam1P29533 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vcam1P29533 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcam1P29533 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcam1P29533 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vcam1P29533 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.22■□□□□ 0.03
Vcam1P29533 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vcam1P29533 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Gm26083-201ENSMUST00000157904 193 ntBASIC15.22■□□□□ 0.03
Vcam1P29533 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.22■□□□□ 0.03
Vcam1P29533 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.22■□□□□ 0.03
Vcam1P29533 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.22■□□□□ 0.03
Vcam1P29533 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.22■□□□□ 0.03
Vcam1P29533 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.22■□□□□ 0.03
Vcam1P29533 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
Vcam1P29533 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Vcam1P29533 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.22■□□□□ 0.03
Vcam1P29533 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.22■□□□□ 0.03
Vcam1P29533 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.22■□□□□ 0.03
Vcam1P29533 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcam1P29533 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Vcam1P29533 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Vcam1P29533 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Vcam1P29533 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.21■□□□□ 0.03
Vcam1P29533 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.21■□□□□ 0.03
Vcam1P29533 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.21■□□□□ 0.03
Vcam1P29533 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Vcam1P29533 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.21■□□□□ 0.03
Vcam1P29533 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.21■□□□□ 0.03
Vcam1P29533 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Vcam1P29533 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcam1P29533 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.21■□□□□ 0.02
Vcam1P29533 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vcam1P29533 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vcam1P29533 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vcam1P29533 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vcam1P29533 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vcam1P29533 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.21■□□□□ 0.02
Vcam1P29533 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Vcam1P29533 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.2■□□□□ 0.02
Vcam1P29533 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.2■□□□□ 0.02
Vcam1P29533 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.2■□□□□ 0.02
Vcam1P29533 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcam1P29533 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms