Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.79□□□□□ -0.36
Cntn1P12960 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cntn1P12960 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.79□□□□□ -0.36
Cntn1P12960 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Gm24644-201ENSMUST00000157114 139 ntBASIC12.79□□□□□ -0.36
Cntn1P12960 Gm22331-201ENSMUST00000158066 136 ntBASIC12.79□□□□□ -0.36
Cntn1P12960 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.79□□□□□ -0.36
Cntn1P12960 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.79□□□□□ -0.36
Cntn1P12960 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.79□□□□□ -0.36
Cntn1P12960 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cntn1P12960 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.79□□□□□ -0.36
Cntn1P12960 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cntn1P12960 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cntn1P12960 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Grk6-205ENSMUST00000224653 2976 ntBASIC12.78□□□□□ -0.36
Cntn1P12960 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.78□□□□□ -0.36
Cntn1P12960 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.78□□□□□ -0.36
Cntn1P12960 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.78□□□□□ -0.36
Cntn1P12960 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Cntn1P12960 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.78□□□□□ -0.36
Cntn1P12960 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.78□□□□□ -0.36
Cntn1P12960 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.78□□□□□ -0.36
Cntn1P12960 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.78□□□□□ -0.36
Cntn1P12960 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.78□□□□□ -0.36
Cntn1P12960 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cntn1P12960 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cntn1P12960 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cntn1P12960 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cntn1P12960 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cntn1P12960 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.77□□□□□ -0.36
Cntn1P12960 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cntn1P12960 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cntn1P12960 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cntn1P12960 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cntn1P12960 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cntn1P12960 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Cntn1P12960 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.77□□□□□ -0.36
Cntn1P12960 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cntn1P12960 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Cntn1P12960 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cntn1P12960 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cntn1P12960 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cntn1P12960 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cntn1P12960 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cntn1P12960 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cntn1P12960 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cntn1P12960 Gm13226-201ENSMUST00000117838 404 ntBASIC12.77□□□□□ -0.37
Cntn1P12960 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.77□□□□□ -0.37
Cntn1P12960 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.77□□□□□ -0.37
Cntn1P12960 Gm29127-201ENSMUST00000188304 517 ntBASIC12.77□□□□□ -0.37
Cntn1P12960 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.77□□□□□ -0.37
Cntn1P12960 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cntn1P12960 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.77□□□□□ -0.37
Cntn1P12960 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cntn1P12960 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.77□□□□□ -0.37
Cntn1P12960 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Cntn1P12960 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cntn1P12960 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms