Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Col4a1P02463 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Col4a1P02463 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Col4a1P02463 Gm9025-201ENSMUST00000122415 1575 ntBASIC16.06■□□□□ 0.16
Col4a1P02463 AC113060.1-201ENSMUST00000225689 1573 ntBASIC16.06■□□□□ 0.16
Col4a1P02463 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.06■□□□□ 0.16
Col4a1P02463 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Col4a1P02463 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a1P02463 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Col4a1P02463 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Col4a1P02463 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC16.05■□□□□ 0.16
Col4a1P02463 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Col4a1P02463 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.05■□□□□ 0.16
Col4a1P02463 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC16.05■□□□□ 0.16
Col4a1P02463 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Col4a1P02463 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Col4a1P02463 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Gm3096-201ENSMUST00000185770 364 ntBASIC16.05■□□□□ 0.16
Col4a1P02463 Gm6652-201ENSMUST00000186414 1070 ntBASIC16.05■□□□□ 0.16
Col4a1P02463 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a1P02463 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.04■□□□□ 0.16
Col4a1P02463 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Col4a1P02463 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.04■□□□□ 0.16
Col4a1P02463 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC16.04■□□□□ 0.16
Col4a1P02463 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Col4a1P02463 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Col4a1P02463 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Gm14277-201ENSMUST00000121195 360 ntBASIC16.04■□□□□ 0.16
Col4a1P02463 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC16.04■□□□□ 0.16
Col4a1P02463 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Col4a1P02463 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Gm8913-201ENSMUST00000209491 641 ntBASIC16.04■□□□□ 0.16
Col4a1P02463 Gm5904-201ENSMUST00000210286 865 ntBASIC16.04■□□□□ 0.16
Col4a1P02463 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.04■□□□□ 0.16
Col4a1P02463 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Col4a1P02463 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Col4a1P02463 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.04■□□□□ 0.16
Col4a1P02463 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a1P02463 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.03■□□□□ 0.16
Col4a1P02463 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col4a1P02463 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Gm4909-201ENSMUST00000118749 794 ntBASIC16.03■□□□□ 0.16
Col4a1P02463 Gm14832-201ENSMUST00000121289 322 ntBASIC16.03■□□□□ 0.16
Col4a1P02463 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.03■□□□□ 0.16
Col4a1P02463 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.03■□□□□ 0.16
Col4a1P02463 AC161537.1-201ENSMUST00000226199 1015 ntBASIC16.03■□□□□ 0.16
Col4a1P02463 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC16.03■□□□□ 0.16
Col4a1P02463 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms